Abstract. Five microalgal strains, selected and successfully isolated to a unialgal
state from mangroves trees in Xuan Thuy National Park, were identified as
Navicula tuscula VACC-001, Chaetoceros muelleri VACC-005, Amphiprora
alata VACC-007, Chlorella vulgaris VACC-012 and Nannochloropsis oculata
VACC-017, based on morphological properties and 18S rDNA sequence analysis.
ASW medium was found to be best suitable medium for their growth and
biomass production. The fatty acid profile of isolated strains showed taxonomic
characteristics. C. muelleri and N. oculata had the highest concentration of
polyunsaturated fatty acids (PUFA), accounting for 36 - 50% of the total fatty acids
with a ratio of ω-3/ω-6 ranging from 2.5 - 4 and a high level of eicosapentaenoic
acid (EPA). A. alata had a significant proportion of arachidonic acid (AA)
and docosahexaenoic (DHA) whereas C. vulgaris was found to have a high
concentration of essential fatty acids and N. tuscula was at the high level of 14:0
+ 16:0 acids, which was necessary for rapid development of larvae. Carbohydrate
content of isolated strains was around 5 - 16% dry weight. The results suggest their
high potential for use as mixed food in bivalve larvae aquaculture due to algal size,
supplementary nutrition value and feasible biomass production.
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JOURNAL OF SCIENCE OF HNUE
Chemical and Biological Sci., 2012, Vol. 57, No. 8, pp. 56-65
This paper is available online at
SELECTION AND ISOLATION OF SOME MICROALGAE STRAINS
FROM MANGROVE IN XUAN THUY NATIONAL PARK
AS FOOD FOR BIVALVE LARVAE
Le Thi Phuong Hoa1, Dang Ngoc Quang2 and Nguyen Thi Hoai Ha3
1Faculty of Biology, Hanoi National University of Education
2Faculty of Chemistry, Hanoi National University of Education
3Institute of Microbiology and Biotechnology, Vietnam National University, Hanoi
Abstract. Five microalgal strains, selected and successfully isolated to a unialgal
state from mangroves trees in Xuan Thuy National Park, were identified as
Navicula tuscula VACC-001, Chaetoceros muelleri VACC-005, Amphiprora
alata VACC-007, Chlorella vulgaris VACC-012 and Nannochloropsis oculata
VACC-017, based on morphological properties and 18S rDNA sequence analysis.
ASW medium was found to be best suitable medium for their growth and
biomass production. The fatty acid profile of isolated strains showed taxonomic
characteristics. C. muelleri and N. oculata had the highest concentration of
polyunsaturated fatty acids (PUFA), accounting for 36 - 50% of the total fatty acids
with a ratio of ω-3/ω-6 ranging from 2.5 - 4 and a high level of eicosapentaenoic
acid (EPA). A. alata had a significant proportion of arachidonic acid (AA)
and docosahexaenoic (DHA) whereas C. vulgaris was found to have a high
concentration of essential fatty acids and N. tuscula was at the high level of 14:0
+ 16:0 acids, which was necessary for rapid development of larvae. Carbohydrate
content of isolated strains was around 5 - 16% dry weight. The results suggest their
high potential for use as mixed food in bivalve larvae aquaculture due to algal size,
supplementary nutrition value and feasible biomass production.
Keywords: Microalgae, mangrove, fatty acid, bivalve larvae, aquaculture.
Received June 4, 2012. Accepted September 11, 2012.
Biology Subject Classification: 10 605.
Contact Le Thi Phuong Hoa, e-mail address: lephhoa@yahoo.com
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Selection and isolation of some microalgae strains from mangrove...
1. Introduction
Xuan Thuy National Park is a part of Red River Delta Biosphere Reserve and it
is large mangrove forest in which microscopic algae (microalgae) are highly diverse and
provide important food sources for many aquatic animals [11]. Microalgae are natural
food for bivalves at all growth stages, for crustaceans and some fish species at the larval
and early juvenile stages and for adult zooplanktons [1, 10]. Approximately thirty percent
of world algal production is used for animal feed [10]. The importance of microalgae
in this application is that they are high in proteins, carbohydrates, lipids, carotenoids,
vitamins and especially polyunsaturated fatty acids (PUFA) such as eicosapentaenoic
acid (EPA), arachidonic acid (AA) and docosahexaenoic acid (DHA), which cannot be
produced in sufficient quantities for metabolic functioning in most marine animals [1,
5]. Many of them are thought to be of nutritional benefit to the larvae and improve
their growth and survival rate [7]. Moreover, algae can grow heterotrophically on cheap
organic substrates under well-controlled cultivation conditions, which would be beneficial
in aquatic culture. A large number of microalgal strains have been selected and studied for
aquaculture applications but thus far only a few,Nannochloropsis, Chaetoceros, Chlorella,
for example, are widely used in aquaculture [7]. In this study, we attempted to select and
isolate some microalgae strains from mangrove areas in Xuan Thuy National Park, to
identify the algae, to identify suitable growth conditions and determine their fatty acid
composition and carbohydrate content to recognize potential aquaculture applications.
2. Content
2.1. Material and methods
2.1.1. Selection, isolation and identification of microalgal strains
Samples were collected from different mangrove sites in Xuan Thuy National
Park, Nam Dinh Province, and cultured in 10 ml jars of f/2 medium. Microalgal
strains were isolated to a unialgal state using micropipettes and agar plates according
to Shirai and et al. [9]. Each strain was photographed using 400-fold OLYMPUS CX41
microscopy. Total DNA was extracted and PCR amplification was performed using
Fawley and Fawley’s method [2] with following primers: forward primer 2F: (2-21)
5’-ATCTGGTTGATCCTGCCAGT-3’ or 1315 F: 5’-CGATAAGGAACGAGACCTT-3’
and reverse primer 1794R: (1794 - 1775) 5’-GATCCTTCCGCAGGTTCACC-3’. PCR
products were directly sequenced in an ABM Prism 3100-Avant Sequencer. The obtained
sequences were analyzed using a BLASTn tool to get the relative identification of each
algal species.
57
Le Thi Phuong Hoa, Dang Ngoc Quang and Nguyen Thi Hoai Ha
2.1.2. Culture conditions of microalgal strains
Microalgal strains were grown in f/2, ASW and ESM media in 150 mL
unaerated flasks [4]. Cells were harvested every two days and counted in a Neubauer
haemocytometer in three replicates. Medium providing best growth of algal cells was
chosen for biomass culture of each strain. The effect of salinity on the growth of C.
muelleriwas also examined with different levels of NaCl concentration from 0%◦ to 40%◦
in f/2 medium.
Biomass culture for later analysis was carried out in 500 ml conical flasks and then
in 4 L flat-bottom round flasks at room temperature illuminated by neon light (Philips
daylight tubes) of 3000 - 4000 lux on 10:14 h light:dark cycles.
2.1.3. Determination of fatty acid composition
Microalgal biomass was collected at the early stationery phase using continuous
centrifugation at 10000 rpm at 4◦C for 15 min, freeze-dried and extracted thereafter with
10 mL of methanol/chloroform (1:1, v/v). The extracts were concentrated under vacuum
and then added to 4 mL of CH3OH-H2SO4 (95:5, v/v) for methylate reaction and stirred at
80◦C for 4 hrs. After that, 2.0 mL of H2Owas added and methyl-esters were extracted with
n-hexane [5]. The n-hexane extracts were analyzed using gas chromatography (Finnigan
Trace GC) in ultra-column BPX70. Fatty acids were identified by comparing retention
times with those of a calibration standard solution.
2.1.4. Determination of carbohydrate content
Freeze-dried microalgal biomass was hydrolyzed in 2.5N HCl for 2 hours. The
hydrolysate was diluted 4 times and centrifuged at 4000 rpm for 15 minutes. Total
carbohydrate content was determined using the phenol-sulfuric acid method [6] using
96-well microplates for spectrophotometric measurement at 490 nm with glucose as the
standard. Total carbohydrate content in the samples was calculated based on the standard
plot.
2.2. Results and discussion
2.2.1. Isolation and identification of isolated microalgal strains
Five microalgal strains, including 3 diatoms, 1 chlorophyte and 1 eustigmatophyte,
were selected and isolated to a unialgal state according to standard literature procedures
based on morphological properties [8] (Figure 1). Sequence analysis and alignment with
sequences on NCBI database gave a positive identity for all strains. Data are shown in
Table 1 together with a short description of their morphology.
58
Selection and isolation of some microalgae strains from mangrove...
Figure 1. Microscopic morphology of microalgal strains isolated
from mangroves in Xuan Thuy National Park
Table 1. Characteristics of microalgal strains isolated
from mangroves in Xuan Thuy National Park
Strain
code
Sequence
length
Matched species Morphology
VACC
001
359bp Navicula tuscula
Cells can be solitary or in pairs and are
approximately 20 - 25 µm long and 9 - 16
µm wide. The valve is symmetrical, with
ends narrowed, protruded and rounded. The
axial area is broad. There are two laminate
chromatophores which sometimes split into
numerous small rounded granules.
VACC
005
652bp
Chaetoceros
muelleri
Cells are usually solitary with oval frustules,
about 5 - 10 µm long. Cells are hexagonal in
girdle view, with a high mantle. Setae do not
touch each other, but arise close to the corners
and diverge perpendicularly to the colony axis.
Each cell has one large chromatophore.
59
Le Thi Phuong Hoa, Dang Ngoc Quang and Nguyen Thi Hoai Ha
VACC
07
678bp Amphiprora alata
Cells usually appear as solitary with a thin
valve, shrink in the middle and with the two
ends rounded. The cell valve surface is a
lozenge/wing-shaped S curve. The girdle is
figure 8 and two pigments are flattened.
VACC
012
692bp
Chlorella
vulgaris
This species usually lives as single cells with
spherical shape, about 2 - 10 µm in diameter
and without flagella.
VACC
017
675bp
Nannochloropsis
oculata
Cells are spherical or slightly ovoid without
flagellate, 2 - 4 µm in diameter. Each cell has
a plastid lacking pyrenoid.
All the isolated strains are of appropriate size for the ingestion of bivalve larvae.
They are not poisonous and some of them have been used as live feed for mariculture
such as N. oculata, C. muelleri [1,7].
2.2.2. Selection of culture medium for isolated microalgal strains
Microalgae are fed to stock in many aquaculture operations and management of
microalgal populations is thus considered to be an integral part of aquaculture. The growth
of microalgae and their fatty acid formation is affected by medium composition and
environmental conditions [1, 5, 7]. In this study it is shown that growth of all strains
was successful in culture media, especially in ASW and f/2 media (Figure 2).
Algal growth rate increased on day 4 of culture and reached a maximum on day 9 -
11 in cultures of diatoms and on day 13 in cultures of chlorophytes and eustimanophytes.
After this time, growth decreased. Growth rate is an important perameter indicating
the relative ecological success of a strain in adapting to its natural or experimental
environment [3]. The cell density of each of the isolated strains increased 20 - 40 times
when reaching the maximum as compared to the starting point. The cell density of N.
tuscula was higher when using an ESM medium but it dropped markedly compared to
ASW and f/2 medium in the following days. Therefore, the ASW medium is best for
growing all strains. This medium can be made without natural sea water and with simple
ingredients suggesting the potential for large scale culture of these strains in experimental
situations or in open areas.
The effect of salinity on the growth of isolated strains was also examined using
different levels from 0%◦ to 40%◦ (data not shown). Salinity is an environmental factor
that has a significant effect on the growth and biochemical composition of marine algae
[3, 7]. This is an important factor when culturing microalgae at an experimental scale. The
growth of all isolated strains was completely inhibited at 0%◦ salinity. However, they were
60
Selection and isolation of some microalgae strains from mangrove...
able to grow at 10 - 40%◦ indicating tolerance to a wide range of salinity concentrations.
The most suitable concentration of salinity for growth is 20 - 30%◦, similar to the range
of salinity presents in the waters in many areas of Xuan Thuy National Park, as previously
reported [11]. Those strains can be cultured and used as live mixture food in aquaculture.
Figure 2. The growth of isolated strains in different culture media
2.2.3. Fatty acid composition
Aquatic animals require dietary lipids to synthesize highly unsaturated fatty acids,
hormones and utilize them as an energy source for embryo and larvae development [1, 3].
Marine microalgae appeared to be one of the most promising PUFA producers [5, 7].
Table 2. Fatty acids composition (weight percentage of total fatty acids)
of microalgal strains isolated from Xuan Thuy National Park
No.
Fatty
acid
Common name N.tuscula C.muelleri A.alata C.vulgaris N.oculata
1 4:0 Butyric 1.17 - - - -
2 10:0 Capric 0.32 - - - -
3 12:0 Lauric 0.64 - 0.63 - 0.41
4 14:0 Myristic 9.69 1.91 13.26 1.53 3.82
5 14:1n-5 Myristoleic 0.80 18.09 - - -
6 15:0 Convolvulinolic - 0.74 1.10 - 0.27
7 15:1n-5 Hormelic 0.70 0.096 0.34 - -
8 16:0 Palmitic 52.56 5.53 14.31 27.43 19.23
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Le Thi Phuong Hoa, Dang Ngoc Quang and Nguyen Thi Hoai Ha
9 16:1n-7 Palmitoleic 13.69 15.23 13.15 5.15 24.67
10 16:1n-9 Ambrettolic - 2.20 4.47 1.2 -
11 17:0 Margric 1.20 9.52 5.01 2.69 0.42
12 17:1n-7 Heptadecenoic 1.49 - 0.82 6.15 -
13 18:0 Stearic 3.77 1.46 4.15 2.91 0.63
14 18:1n-7 Asclepic 8.62 3.74 4.65 - -
15 18:1n-9 Oleic - - - 20.06 -
16 18:2n-6 Linoleic - - - 8.42 6.15
17 18:2n-6-t Linelaidic 1.27 2.70 - - -
18 18:3n-3
α-linolenic
(ALA)
- - - 17.46 1.76
19 18:3n-6
γ-linolenic
(GLA)
0.35 1.12 - - 0.55
20 18:4n-3 Octadecatetraenoic - 0.22 0.59 - 0.55
21 18:5n-3 Octadecapentaenoic 1.56 - 0.58 - -
22 20:0 Arachidic - 1.05 2.21 4.98 -
23 20:0 Isoarachidic - - 0.92 - -
24 20:1n-7 Paullinic - 0.26 - - -
25 20:1n-9 Gondoic - 0.10 1.45 - -
26 20:3n-6 Eicosatrienoic - - - - 0.24
27 20:4n-3 Eicosatetraenoic - - - - 0.24
28 20:4n-6
Arachidonic
(AA)
0.76 7.84 7.97 - 4.57
29 20:5n-3 EPA - 24.76 9.12 - 36.48
30 22:0 Behenic 1.04 - - - -
31 22:4n-6 Adrenic 0.34 - - - -
32 22:5n-6
Docosatetraenoic
(DPA)
- - 3.65 - -
33 22:6n-3 DHA - - 5.25 - -
34 24:0 Lignoceric - 0.12 2.83 - -
Saturated fatty
acids
70.39 20.33 44.43 39.55 24.15
Unsaturated fatty
acids
29.58 76.36 52.21 59.24 75.22
ω-3 1.56 24.98 15.61 17.46 39.03
ω-6 1.45 10.54 11.62 8.42 11.52
PUFAs 4.28 36.64 27.16 25.88 50.55
(-): not determined
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Selection and isolation of some microalgae strains from mangrove...
The fatty acid composition of isolated strains (Table 2) has shown systematic
differences according to taxonomic groups as previously reported [1]. Three diatom
strains have fatty acids ranging from 10C to 24C fatty acid. The predominant fatty
acids found in diatoms were 14:0, 16:0, 16:1n-7 and 20:5n-3, which in total accounted
for 50 - 75% of the total fatty acids (Table 2). The content of 16:0 and 14:0 in C.
muelleri VACC-005 was exceptionally low comparing to other diatoms and C. calcitrans
in previous reports [1, 7] whereas the content of 14:1n-5 was high. This possibly is due to
the occurrence of δ9 desaturation of 14:0. Meanwhile, the predominant in the chlorophytes
were 16:0, 18:1 n-9, 18:2 n-6 and 18:3 n-3 (73% of total fatty acids) and those in the
eustimanophytes were 16:0, 16:1n-7 and 20:5n-3 (80% of total fatty acids).
C. muelleri VACC-005 and N. oculata VACC-017 had highest level of unsaturated
fatty acids, more than half of which was PUFAs, 36.64% and 50.55% total fatty acids,
respectively. The fatty acid composition and content, especially PUFAs such as EPA
and DHA, are of major importance in determining the nutritional value of microalgae.
Species of microalgae rich in these PUFAs are generally assumed to be of high nutritive
value [5, 10]. Many marine bivalves show a low capacity for synthesis of PUFAs, which
are considered essential for growth, development, and cellular function and thus have
to acquire them through dietary sources [6]. The ω-3/ω-6 ratio in these two strains is
about 2.5 - 4.0. The high ω-3/ω-6 ratio is thought to be of high nutritive value for many
animals [7]. C. muelleri VACC-005 and N. oculata VACC-017 had significantly high
level of EPA. C. muelleri VACC-005 also contained remarkable amount of AA (20:4n-6),
higher than previously reported in Chaetoceros strains [7]. EPA and AA are important
nutritional factors which play a vital role in the synthesis of eicosanoid compounds such
as prostaglandins, which are precursors of compounds known as tissue hormones [5, 7].
Based on the high proportion of PUFAs, including EPA and AA, C. muelleri and N.
oculata strains can be grouped with algae which are of good food quality in the marine
ecosystem and can be used as widely as C. calcitrans in aquaculture for bivalve molluscs,
crustacean larvae and others, especially in the early stage due to their small size.
The concentration of PUFAs in A. alata VACC-007 was not as high as in C.
muelleri and N. oculata strains but this strain possessed a considerable proportion of very
long-chain PUFAs, DPA and DHA, 3.6% and 5.2%, repectively. DHA is an important
membrane component and plays a role in tissue regeneration. C20 and C22 PUFAs were
not detectable in C. vulgaris VACC-012 as many other chlorophytes [1]. However, the
level of linoleic and α-linolenic in this strain was highest. These are essential fatty acids
which most animal cannot synthesize and must aquire from their daily food to form longer
chain PUFA. Unlike the above strains, N. tuscula VACC-001 has a high level of saturated
fatty acids, most of which is 16:0 (52.56% of the total fatty acids). It was reported that
there is relationship between 14:0 + 16:0 content of microalgae and the growth rate of
63
Le Thi Phuong Hoa, Dang Ngoc Quang and Nguyen Thi Hoai Ha
Pacific oyster larvae, Crassostrea gigas. It was thought that these saturated fatty acids
were beneficial for rapid growth of larvae as they provided energy more efficiently than
unsaturated fatty acids [1]. Therefore, a mixture of isolated strains provided at different
growth stages of larvae can provide efficient fatty acids for their metamorphosis and
development.
2.2.4. Carbohydrate content
Figure 3. Carbohydrate content of microalgal strains isolated
from mangrove in Xuan Thuy National Park
The carbohydrate content of five strains ranged from 5 - 16% dry weight, similar
to the result of an analysis in 40 microalgal species by Brown and et al. [1]. C.
vulgaris VACC-012 and N. oculata VACC-017 had the highest content of carbohydrates.
Carbohydrates play an important role in balancing the utilization of protein and lipids
for biosynthesis against catabolism for energy production. It was reported that with an
adequate supply of protein and lipids, the use of C. muelleri, containing high levels of
carbohydrates, enhanced the growth of oyster juveniles, Ostrea edulis [7].
3. Conclusion
Microalgae are a unique source of high-value compounds such as polysaccharides
and, in particular, long-chain PUFAs which animals cannot sufficiently synthesize
themselves. Therefore, cultured microalgae remain a critical resource for commercial
rearing of marine animals. Five microalgal strains isolated from mangrove of the Xuan
Thuy National Park are suggested to be good candidates to serve as mixed live feed for
bivalve larvae. They are of different sizes but they are ingestible and digestible for larvae
at the various stages of their development. With a diverse fatty acid composition especially
rich in PUFAs, they are presumably able to supplement one another and provide an
adequate mix of fatty acids and carbohydrates. The success of indoor biomasss production
of those strains would increase the potential of large-scale production in open hatcheries.
64
Selection and isolation of some microalgae strains from mangrove...
Acknowledgements. This work was supported by the Ministry of Education and
Training, Vietnam, through the Hanoi National University of Education (Project number
B2009-17-198).
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